Welcome to Kennedy-Rodrigue Lab documentation!

Note

This documentation is under active development

• Server
  • Map Network Directory
  • Login with Command Line
  • Software
  • Parallel Jobs
    • SLURM
    • Sun Grid Engine
  • Testing and Debugging
  • Open OnDemand (OOD)
  • Profiles
  • Technical Information
• Admin
  • Glossary
  • Schedule MRI
    • UTD’s Brain Health Imaging Center (BHIC)
    • UTSW’s Advanced Imaging Research Center (AIRC)
• Study: Dallas Area Longitudinal Lifespan Aging Study (DALLAS)
  • Conversion
    • Download
    • Convert
    • QC Parameters
    • Copy Files
  • T1w
    • Preprocessing
  • fMRI Data Processing
    • Preparing the data for fMRI preprocessing
    • fMRI Preprocessing
• Study: Preclinical Alzheimer’s MCI Study (PAMS)
  • Conversion
    • Data Entry
    • Convert
    • QC Parameters
  • mri
    • T1w
  • pet
    • Amyloid Pipeline Description
• Scripts
  • Coding
    • bash Script Template
    • Common Issues
• Containers
  • Build Containers
    • Option #1
    • Option #2
    • Option #3
  • Run Containers
    • Skeleton
    • Common Singularity Options
    • Example